Influence of Storage Methods of Whole Blood Samples on DNA Integrity in Epidemiological Studies

Jump To References Section

Authors

  • Department of Public Health Dentistry, Vivekanandha Dental College and Hospital for Women, Tiruchengode, 637205 ,IN
  • Department of Public Health Dentistry, Tamilnadu Government Dental College and Hospital, Chennai 600003 ,IN
  • Department of Veterinary Microbiology, Madras Veterinary College, Chennai 600007 ,IN
  • Department of Public Health Dentistry, Tamilnadu Government Dental College and Hospital, Chennai 600003 ,IN
  • Department of Public Health Dentistry, Tamilnadu Government Dental College and Hospital, Chennai 600003 ,IN
  • Department of Public Health Dentistry, Tamilnadu Government Dental College and Hospital, Chennai 600003 ,IN

Keywords:

DNA isolation, Genetic epidemiology, Whole blood
Dental Public Health

Abstract

Objectives: To investigate the influence of storage methods of whole blood samples on Deoxyribonucleic acid (DNA) quality.
Method and materials: Whole blood samples were collected from 90 patients reported to the Government Tertiary-care Dental College and Hospital, Tamil Nadu, India. The blood samples were stored at three different temperatures -80 °C, -20 °C, 4 °C which were analyzed for DNA quality immediately within 4 h and after a storage period of 60 days. Quantification of DNA in the sample was recorded using a spectrophotometer..
Results: The average concentration of isolated DNA ranged from 0.5 ng/μl to 154.2 ng/μl with purity A260/A280ratio ranging from 0.7 to 2.0. The mean DNA concentration H = 97.2 (p = 0.001) and purity H = 80.1 (p = 0.001) obtained from whole blood stored at 4 °C were statistically significant. Thus samples stored at 4 °C did not affect on DNA yield and quality..
Conclusion: We conclude that storage at 4 8C temperature for whole blood does not substantially affect the molecular assay measurements. This study enlightens the influence of storage temperatures and duration in genetic epidemiology.

Published

2018-09-18

How to Cite

Rahila, C., Narayanan, M. B. A., Kirubaharan, J. J., Kumar, S. .G. R., Selvamary, A. L., & Sujatha, A. (2018). Influence of Storage Methods of Whole Blood Samples on DNA Integrity in Epidemiological Studies. Journal of Pierre Fauchard Academy (India Section), 31(2-4), 89–92. Retrieved from https://informaticsjournals.com/index.php/jpfa/article/view/21123

Issue

Section

Original Articles

 

References

Johnson L, Genco RJ, Damsky C, et al. Genetics and its implications for clinical dental practice and education: report of panel 3 of the Macy study. J Dent Educ. 2008;72 (suppl):86–94.

Venter JC, Adams MD, Myers EW, et al. The sequence of the human genome. Science. 2001;29:1304–1351.

Richardson AJ, Narendran N, Guymer RH, Vu H, Baird PN. Blood storage at 4 8C-factors involved in DNA yield and quality. J Lab Clin Med. 2006;147:290–294.

Cushwa WT, Medrano JF. Effects of blood storage time and temperature on DNA yield and quality. Biotechniques. 1993;14:204–207.

Visvikis S, Schlenck A, Maurice M. DNA extraction and stability for epidemiological studies. Clin Chem Lab Med. 1998;36:551–555.

Suuriniemi M, Mahonen A, Kovanen V, Alen MCS. Relation of PvuII site polymorphism in the COL1A2 gene to the risk of fractures in prepubertal Finnish girls. Physiol Genomics. 2003;14:217–224.

Mychaleckyj JC, Farber EA, Chmielewski J, Artale J, Light LS, Bowden DW. Buffy coat specimens remain viable as a DNA source for highly multiplexed genome-wide genetic tests after long term storage. J Transl Med BioMed Central Ltd. 2011;9:91.

Carpi FM, Di Pietro F, Vincenzetti S, Mignini F, Napolioni V. Human DNA extraction methods: patents and applications. Recent Pat DNA Gene Seq. 2011;5:1–7.

Dickinson JL, Sale MM, Craig JE, Mackey DA. Laboratory methods in ophthalmic genetics: obtaining DNA from patients. Ophthalmic Genet. 2001;22:49–60.

Abraham JE, Maranian MJ, Spiteri I, et al. Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping. BMC Med Genomics. 2012;5:1–6.

Philibert Ra, Zadorozhnyaya O, Beach SRH, Brody GH. Comparison of the genotyping results using DNA obtained from blood and saliva. Psychiatr Genet. 2008;18:275–281.

Zhou J, Wu J, Zhao X, et al. Biostorage and quality control for human peripheral blood leukocytes. Biopreserv Biobank. 2015;13:13–19.

Lahiri DK, Schnabel B. DNA isolation by a rapid method from human blood samples: effects of MgCl2, EDTA, storage time and temperature on DNA yield and quality. Biochem Genet. 1993;31:321–328.

Madisen L, Hoar DI, Holroyd CD, Crisp M, Hodes ME. DNA banking: the effects of storage of blood and isolated DNA on the integrity of DNA. Am J Med Genet. 1987;27:379–390.

Howlett SE, Castillo HS, Gioeni LJ, et al. Evaluation of DNA stable for DNA storage at ambient temperature. Forensic Sci Int Genet. 2014;8:170–178.

Hansen TV, Simonsen MK, Nielsen FC, Hundrup YA. Collection of blood, saliva, and buccal cell samples in a pilot study on the Danish nurse cohort: comparison of the response rate and quality of genomic DNA. Cancer Epidemiol Biomarkers Prev. 2007;16:2072–2076.

Udtha M, Flores R, Sanner J, et al. The protection and stabilization of whole blood at room temperature. Biopreserv Biobank. 2014;12:332–336.

Rogers NL, Cole SA, Lan HC, Crossa A, Demerath EW. New saliva DNA collection method compared to buccal cell collection techniques for epidemiological studies. Am J Hum Biol. 2007;19:319–326.